This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000QC31.1

Indonesia/LOC_000QC31.1/2023-02-21
M.-S. Rieu, S.-R. Ji, H.-R. Byun, S.-W. Han, C.-Y. Choi, H.-Y. Nam, S.-G. Seo & J.-S. Chae

Seoul National University, Labaratory of Veterinary Internal Medicine

Sample details

Collection date
2023-02-21
Earliest release date
2024-08-15
Sampling location
Indonesia
Isolate name
IN11T8

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-18 16:23insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2024-08-15
INSDC accession S

Host

Host

Submission details

Submission ID
PP334104.1.S
Submitting group
Date submitted
2026-06-18 16:23:49 UTC
Date released
2026-06-18 16:27:49 UTC

reference_S
[{"label":"Variant S","name":"variant_S","customDisplay":{"type":"variantReference","displayGroup":"reference_S","label":"Closest reference S"},"value":true,"header":"Clade & Lineage","type":{"kind":"metadata","metadataType":"boolean"}}]

Clade & Lineage

Closest reference S
N/A (variant)

Files

Annotations

Alignment and QC

Length S
260 (14.4%)
Total SNPs S
38

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • G276A
  • G282A
  • C294T
  • A309G
  • A315G
  • A321G
  • A333G
  • G337T
  • G339A
  • C342A
  • T348C
  • G351A
  • A363G
  • G365A
  • T366C
  • A370G
  • A378G
  • A381G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:A100S
  • NP:S109N
  • NP:T111A
Deletions
N/A
Insertions
N/A