This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000QB16.1

Iraq/LOC_000QB16.1/2023-09-15
R. R. Sulaiman & M. O. Babashekh

University of Sulaimani, College of Veterinary Medicine, Microbiology

Sample details

Collection date
2023-09-15
Earliest release date
2024-04-27
Sampling location
Iraq
Isolate name
CCHF/sharazoor/Iraq

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-18 16:23insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2024-04-27
INSDC accession S

Host

Host

Submission details

Submission ID
OR713754.1.S
Submitting group
Date submitted
2026-06-18 16:23:49 UTC
Date released
2026-06-18 16:27:49 UTC

reference_S
[{"label":"Variant S","name":"variant_S","customDisplay":{"type":"variantReference","displayGroup":"reference_S","label":"Closest reference S"},"value":true,"header":"Clade & Lineage","type":{"kind":"metadata","metadataType":"boolean"}}]

Clade & Lineage

Closest reference S
N/A (variant)

Files

Annotations

Alignment and QC

Length S
516 (28.6%)
Total SNPs S
66

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T141C
  • C150T
  • G153A
  • T156C
  • T166C
  • C171T
  • A173G
  • G174A
  • G180A
  • C183T
  • A186G
  • A193G
  • C198T
  • C201T
  • G231A
  • T234A
  • G240A
  • G243A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:K45R
  • NP:S52G
  • NP:D116E
  • NP:A124S
  • NP:R177K
  • NP:Q179L
  • NP:D199E
Deletions
N/A
Insertions
N/A